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Accueil > Français > Équipes > Biodiversité microbiennes et adaptations fonctionnelles (BioADAPT) > Publications

2016

par DavidB - publié le

ARTICLES SCIENTIFIQUES PUBLIES EN 2016

  • Ballaud FC, Dufresne A, Francez AJ, Colombet J, Sime-Ngando T, Quaiser A (2016) Dynamics of viral abundance and diversity in a Sphagnum-dominated peatland : temporal fluctuations prevail over habitat. Frontiers in Microbiology 6:1494. doi:10.3389/fmicb.2015.01494
  • Chassiot L, Chapron E, Di Giovanni C, Alberic P, Lajeunesse P, Lehours AC, Meybeck M (2016) Extreme events in maar lake Pavin sedimentary record : implication for natural hazards assessment in the French Massif Central. Quaternary Science Reviews 141:9-25.
  • Fokam Z, Nana PA, Bricheux G, Vigues B, Bouchard P, Ngassam P, Sime-Ngando T (2016) Correlation between some environmental variables and abundance of Almophrya mediovacuolata (Ciliophora : Anoplophryidae) endocommensal ciliate of an anecic earthworms (Oligochaeta : Annelida) in Bambui (North West Cameroon). International Journal of Biological and Chemical Sciences 10:1983-1997.
  • Genitsaris S, Monchy S, Denonfoux J, Ferreira S, Kormas Ar. K, Sime-Ngando T, Viscogliosi E, Christaki U (2016) Marine microbial community structure assessed from combined metagenomics analysis and ribosomal amplicon deep-sequencing. Marine Biology Research 12:30-42
  • Hidalgo-Galiana A, Monge M, Biron DG, Canals F, Ribera I, Cieslak A (2016) Protein expression parallels thermal tolerance and ecologic changes in the diversification of a diving beetle species complex. Heredity 116:114–123.
  • Jephcott TG, Sime-Ngando T, Gleason FH, Macarthur DJ (2016) Host-parasite interactions in food webs : Diversity, stability, and coevolution. Food Webs 6 : 1-8.doi:10.1016/j.fooweb.2015.12.001
  • Keraval B, Lehours AC, Colombet J, Alvarez G, Amblard C, Fontaine S (2016) Soil carbon dioxide emissions controlled by an extracellular oxidative metabolism identifiable by its isotope signature. Biogeosciences 13:6353-6362
  • Krupovic M, Dutilh BE, Adriaenssens EM, Wittmann J, Vogensen FK, Sullivan MB, Rumnieks J, Prangishvili D, Lavigne R, Kropinski AM, Klumpp J, Gillis A, Enault F et al. (2016) Taxonomy of prokaryotic viruses : update from the ICTV bacterial and archaeal viruses subcommittee. Archives of Virology 161(4):1095-1099.
  • Lampe N, Biron DG, Brown JMC, Incerti S, Marin P, Sarramia D, Seznec H, Breton V (2016) Simulating the impact of the natural radiation background on bacterial systems : implications for very low radiation biological experiments. Plos ONE 11 (11):e0166364. doi:10.1371/journal.pone.0166364
  • Lehours AC, Le Jeune AH, Aguer JP, Cereghino R, Corbara B, Keraval B, Leroy C, Perriere F, Jeanthon C, Carrias JF (2016) Unexpectedly high bacteriochlorophyll a concentrations in neotropical tank bromeliads. Environmental Microbiology Reports doi : 10.1111/1758-2229.12426
  • Mobili OB, Lontsi Djimeli C, Moungang Lm, Allaahdin O, Tamsa Arfao A, Mabingui J, Bricheux G, Nola M, Sime-Ngando T (2016) Microbial treatment of water containing the bacteria Enterococcus faecalis and Escherichia coli in microcosm using Artemesia annua plant extract : Hierarchical order of some abiotic factors affecting cell’s cultivability. European Journal of Biotechnology and Bioscience 4:16-26.
  • Pradeep Ram AS, Chaibi-Slouma S, Keshri J, Colombet J, Sime-Ngando T (2016). Functional responses of bacterioplankton diversity and metabolism to experimental bottom-up and top-down forcings. Microbial Ecology 72(2):347-358.
  • Pradeep Ram AS, Colombet J, Perriere F, Thouvenot A, Sime-Ngando T (2016). Viral regulation of prokaryotic carbon metabolism in a hypereutrophic freshwater reservoir ecosystem (Villerest, France). Frontiers in Microbiology 7 : 81.
  • Roux S, Enault F, Ravet V, Colombet J, Bettarel Y, Auguet JC, Bouvier T, Lucas-Staat S, Vellet A, Prangishvili D, Forterre P, Debroas D, Sime-Ngando T (2016) Analysis of metagenomic data reveals common features of halophilic viral communities across continents. Environmental Microbiology 18:889-903.
  • Tamsa Arfao A, Lontsi Djimeli C, Noah Ewoti Ov, Bricheux G, Nola M, Sime-Ngando T (2016) Detachment of adhered enteropathogenic Escherichia coli cells from polythene fragments immersed in aquatic microcosm using Eucalyptus microcorys extract (Myrtaceae). Current Research in Microbiology and Biotechnology 4:847-857.

OUVRAGES ET CHAPITRES D’OUVRAGE 2016

  • AUBERT J. et al., including SIME-NGANDO T (authors) 2016. Insight on environmental genomics, the high-throughput sequencing revolution. French and English versions under the direction of FAURE D and JOLY D, ISTE Editions, London, 174p
  • Bronner G, Debroas D, Enault F, Hugoni M, Jouan I, Mary I, Ravet V, Roux S, Taib N (2016) Study of microorganisms and virus in aquatic ecosystems by metagenetic and metagenomic approaches. In : Sime-Ngando T, Amblard C, Boivin P, Chapron E, Jezequel D, Meybeck M. (Editors) : Lake Pavin : History, biogeochemistry and sedimentology of a deep meromictic crater lake, Chapter 27, Springer, The Netherlands.
  • Chassiot L, Chapron E, Miras Y, Schwab Mj, Alberic P, Beauger A, Develle Al, Arnaud F, Lajeunesse P, Zocatelli R, Bernard S, Lehours Ac, Jezequel D. Lake Pavin paleolimnology and event stratigraphy. In : Sime-Ngando T., Amblard C., Boivin P., Chapron E., Jezequel D. Meybeck M. (Editors) : Lake Pavin : History, biogeochemistry and sedimentology of a deep meromictic crater lake, Chapter 27, Springer, The Netherlands.
  • Lehours, AC, Borrel G, Morel-Desrosiers N, Bardot C, Grossi V, Keraval B, Attard A, Morel JP, Amblard C, Fonty G. (2016) Anaerobic microbial communities and processes involved in the methane cycle in freshwater lakes - a focus on lake Pavin. In : Sime-Ngando T, Boivin P, Chapron E, Jezequel D, Meybeck M (Eds.), Lake Pavin : History, biogeochemistry and sedimentology of a deep meromictic crater lake, Chapter 16, pp. 255-284, Springer, The Netherlands.
  • Sime-Ngando T, Bettarel Y, Colombet J, Palesse S, Pradeep Ram AS, Charpin M & Amblard C, 2016. Lake Pavin : A pioneer site for ecological studies of freshwater viruses. In : Sime-Ngando T, Boivin P, Chapron E, Jezequel D & Meybeck M (Eds.), Lake Pavin : History, biogeochemistry and sedimentology of a deep meromictic crater lake, Chapter 14, pp. 229-244, Springer, The Netherlands.
  • Sime-Ngando T (2016) Preface. In : Sime-Ngando T, Boivin P, Chapron E, Jezequel D, Meybeck M (Editors) - Lac Pavin - History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake. Springer, The Netherlands, pages i-xv.
  • Sime-Ngando T, Gerphagnon M, Colombet J, Jobard M, Lefevre E, Monchy S, Rasconi S, Latour D, Carrias Jf, Amblard C (2016) : Molecular diversity studies in Lake Pavin reveal the ecological importance of parasitic true fungi in the plankton. In : Sime-Ngando T, Boivin P, Chapron E, Jezequel D, Meybeck M (Editors) - Lac Pavin - History, geology, biogeochemistry, and sedimentology of a deep meromictic maar
  • lake. Springer, The Netherlands, p. 329-443.
  • Carrias Jf, Amblard C, Sime-Ngando T (2016) The significance of transparent exopolymeric particles (TEP) for microorganisms in Lake Pavin. In : Sime-Ngando T, Boivin P, Chapron E, Jezequel D, Meybeck M (Editors) - Lac Pavin - History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake. Springer, The Netherlands, pages 223-228.
  • Carrias JF, Amblard C, Bourdier G, Sime-Ngando T (2016) The importance of phagotrophic protists in Lake Pavin. In : Sime-Ngando T, Boivin P, Chapron E, Jezequel D, Meybeck M (Editors) - Lac Pavin - History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake. Springer, The Netherlands, pages 307-314.
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